BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D08SP1|AL426361
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 1439 0.0
>3x_Contig1478
Length = 9651
Score = 1439 bits (719), Expect = 0.0
Identities = 750/769 (97%)
Strand = Plus / Plus
Query: 1 gatccatcacagagtgaactactagccagttatacgatacaatatccaccaataaagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 gatccatcacagagtgaactactagccagttatacgatacaatatccaccaataaagtcc 1782
Query: 61 aaaataacaataaatcacaaaacataacaaacaaattaacatgtcaacaccaaaagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 aaaataacaataaatcacaaaacataacaaacaaattaacatgtcaacaccaaaagagtg 1842
Query: 121 caacgncagaccatatttatgtgadatttgtgggaacagattccataggttggracacaa 180
||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 1843 caacgacagaccatatttatgtgaaatttgtgggaacagattccataggttggaacacaa 1902
Query: 181 gacaaggcatatacgaacacacacaggagakaagcctttcgcatgcncggttcctggttg 240
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 1903 gacaaggcatatacgaacacacacaggagaaaagcctttcgcatgcacggttcctggttg 1962
Query: 241 tcccmagcgatttagccgaaatgacgaattaaagagacacatcaaaacacatttcaaatc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1963 tcccaagcgatttagccgaaatgacgaattaaagagacacatcaaaacacatttcaaatc 2022
Query: 301 aagaaaaagaaagccaagaaccattagacctaaatccagatcatccagtcaggtaaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2023 aagaaaaagaaagccaagaaccattagacctaaatccagatcatccagtcaggtaaatct 2082
Query: 361 agctccaatgnatgnacagggtnttccagttaataataccgataaacttatagccccmca 420
||||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 2083 agctcaaatgaatgaacagggtattccagttaataataccgataaacttatagccccaca 2142
Query: 421 gccaactctacctgctatgatccctgtgccatatcatttacmaacttcmatgtacttaga 480
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 2143 gccaactctacctgctatgatccctgtgccatatcatttacaaacttcaatgtacttaga 2202
Query: 481 cgtggaaaraccagcccagtttgctcccatatctcagaattccmgtngcmgcttggtgaa 540
|||||||| |||||||||||||||||| ||||||||||||||| || || ||||||||||
Sbjct: 2203 cgtggaaaaaccagcccagtttgctccaatatctcagaattccagtagcagcttggtgaa 2262
Query: 541 cactattttcacggaacacagcgacatgagctcgtcgaggctaagtagcctaacaaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 cactattttcacggaacacagcgacatgagctcgtcgaggctaagtagcctaacaaactc 2322
Query: 601 accaaacctggtagcttcgtcatcaggtgctcatgaagaccactacctacacaccatgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 accaaacctggtagcttcgtcatcaggtgctcatgaagaccactacctacacaccatgtc 2382
Query: 661 aagcaagaatctgttaacagccttgagtgcacttcaaggaatgaccccaatacgaaaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 aagcaagaatctgttaacagccttgagtgcacttcaaggaatgaccccaatacgaaaaag 2442
Query: 721 caactcattacaggacttacaaccccmcgatacaaacctcgaggagaga 769
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2443 caactcattacaggacttacaaccccacgatacaaacctcgaggagaga 2491
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4044
Number of Sequences: 1807
Number of extensions: 4044
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)